Job Description P37679 Confidence 98.17% Date Thu Jan 5 11:56:53 GMT 2012 Rank 43 Aligned Residues 226 % Identity 11% Template c3p14C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans Resolution 2.51 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.				.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																										.	.	.	.											.	.	.
Query SS confidence																															.	.	.	.	.	.																										.	.	.	.											.	.	.
Query Sequence		W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	.	.	.	.	.	.	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	.	.	.	.	A	R	D	L	G	I	R	T	I	Q	.	.	.	L	A	G
Query Conservation																															.	.	.	.	.	.																										.	.	.	.											.	.	.
Alig confidence																							.								.	.	.	.	.	.																										.	.	.	.											.	.	.
Template Conservation																							.
Template Sequence		L	E	P	R	H	F	E	K	W	V	R	W	A	K	R	H	G	L	G	L	D	.	F	N	P	T	L	F	S	H	E	K	A	K	D	G	L	T	L	A	H	P	D	Q	A	I	R	Q	F	W	I	D	H	C	I	A	S	R	K	I	G	E	Y	F	G	K	E	L	E	T	P	C	L	T	N	I	W	I	P	D
Template Known Secondary structure				G	G	G	G											T					.						S	S	S	G	G	G	T	T	S		S	T	T		S	S																										T	S
Template Predicted Secondary structure																							.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																										.																.	.	.
Query SS confidence																										.																.	.	.
Query Sequence		Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	.	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	.	.	.	D	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N
Query Conservation																										.																.	.	.
Alig confidence																										.																.	.	.
Template Conservation
Template Sequence		G	Y	K	D	T	P	S	D	R	L	T	P	R	K	R	L	K	E	S	L	D	Q	I	F	A	A	E	I	N	E	A	Y	N	L	D	A	V	E	S	K	L	F	G	I	G	S	E	S	Y	V	V	G	S	H	E	F	Y	L	S	Y	A	L	K	N	D	K	L	C	L	L	D	T	G	H	Y	H	P	T	E	T
Template Known Secondary structure				S	S			S		S															T		S				T	T	T									S		B	T	T	B		S			S	S												T	T							T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																								.
Query SS confidence											.	.																																																								.
Query Sequence		D	V	P	A	E	L	K	L	G	.	.	I	D	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F	V	G	I	F	K	T	L	H	K	L	N	Y	R	G	S	F	L	I	E	M	.	W	T	E	K	A	K	E	P	V	L	E	I	I
Query Conservation											.	.																																																								.
Alig confidence											.	.																			.	.	.	.	.	.	.	.	.																													.
Template Conservation																															.	.	.	.	.	.	.	.	.
Template Sequence		V	S	N	K	I	S	A	M	L	L	F	H	D	K	L	A	L	H	V	S	R	P	V	R	W	D	S	D	H	.	.	.	.	.	.	.	.	.	V	V	T	F	D	D	E	L	R	E	I	A	L	E	I	V	R	N	D	A	L	D	R	V	L	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	T
Template Known Secondary structure		S												S								B		S	S	S				B	.	.	.	.	.	.	.	.	.				S														T	T		T	T	T										T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.										.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	R	W	I	E	A	R	M	Q	E	A	G	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	T	R	N	V	I	K	A	L	L	F	A	M	L	I
Template Known Secondary structure																T	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions