Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence94.99%DateThu Jan 5 11:56:53 GMT 2012
Rank57Aligned Residues113
% Identity15%Templatec3o6cA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.. .......60.........70.........80.........90.....
Predicted Secondary structure 

















..















Query SS confidence 


































. .










































Query Sequence  SWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSA. . AQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERARE
Query Conservation          
   

  


                ..             

 
                
   
     
Alig confidence 


































..


















..........







......
Template Conservation     
 
 


  

  





 
 
 






     
   
  
   





..........



  
 ......
Template Sequence  LNDEILNLALKLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSL. . . . . . . . . . FINPSLED. . . . . .
Template Known Secondary structure  S


S


SGGGB
TTSSB
TT
TTTT
..........
S
......
Template Predicted Secondary structure 























..........


......
Template SS confidence 















































































   71........80.........90.........100.........110.........120...... ...130....
 
   96...100.........110.........120..... ....130.........140.........150.
Predicted Secondary structure 













......................

Query SS confidence 





























. . . . . . . . . . . . . . . . . . . . . .

























Query Sequence  IMSKAIRLARDLGIRTIQLAGYDVYYEDHD. . . . . . . . . . . . . . . . . . . . . . EGTRQRFAEGLAWAVEQAAASQVMLA
Query Conservation       
  
  

   
    
        ......................          
      
   

 
 
Alig confidence  .....
























......................

























Template Conservation  .....
  
   


 





 

             
     
             

  
  

  
  


 

Template Sequence  . . . . . IEKSKILKAQFIELHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVA
Template Known Secondary structure  .....TT
S

SSGGGSTT

GGG
S
TT
Template Predicted Secondary structure  .....





























Template SS confidence 













































































   135....140.........150.........160.........170.........180.........190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions