Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence35.49%DateThu Jan 5 11:56:53 GMT 2012
Rank405Aligned Residues125
% Identity16%Templatec3ng3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90... ....
Predicted Secondary structure 
































...
Query SS confidence 








































































. . .



Query Sequence  ERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERA. . . REIM
Query Conservation       
   

  


                             

 
                
   
   ...    
Alig confidence 

















































...............







...



Template Conservation   
   
   

 


 


   
  
    
  

  
        



...............


  

 
   
 
Template Sequence  HEAALAVASGAAEIDMVIDVGAALAGDLDGVRADIAAVRGAVGGAVLKVI. . . . . . . . . . . . . . . VESSALLALADEHTL
Template Known Secondary structure  TT
S

TT
TTS...............

S
Template Predicted Secondary structure 












...............








Template SS confidence 















































































   78.80.........90.........100.........110.........120....... ..130.........140..
 
   98.100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 























Query SS confidence 










































































Query Sequence  SKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEM
Query Conservation     
  
  

   
    
                  
      
   

 
 

               

  
Alig confidence 






































......








......














Template Conservation    
      











    


   
  
    ......     



......




   
   
 
Template Sequence  VRVCRAAEDAGADFVKTSTGFHPSGGASVRAVALMAEAV. . . . . . GGRLGVKAS. . . . . . GGIRTAADALAMLDA
Template Known Secondary structure  TT
S


S

TT
S

......TTSS......SS

ST
Template Predicted Secondary structure 















......




......




Template SS confidence 










































































   143......150.........160.........170.........180. ........190 .........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions