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Job DescriptionP37679
Confidence50.70%DateThu Jan 5 11:56:53 GMT 2012
Rank334Aligned Residues130
% Identity11%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60...... ...70.........80.........90.....
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Query Sequence  WPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETG. . . VGIPSMCLSAHRRFPFGSRDEAVRERARE
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Template Sequence  TAALIDDLIKAGVDGLFFLGSGGEFSQ. . . . LGAEERKAIARFAIDHVDRRVPVLIGTGGTN. . . . . . . . . . . . . . . . AR
Template Known Secondary structure  TT
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SSTTTTGGG....S
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   36...40.........50.........60.. .......70.........80.........90... ..
 
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Query Sequence  IMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLA
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Template Sequence  ETIELSQHAQQAGADGIVVINPYYWKVSEAN. . . . . LIRYFEQVADSV. TLPVMLYNFPALTGQDLTPALVKTLADSRS
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   96...100.........110.........120...... ...130........ .140.........150.........160........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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