Job Description P37679 Confidence 50.70% Date Thu Jan 5 11:56:53 GMT 2012
Rank 334 Aligned Residues 130
% Identity 11% Template c3n2xB_
PDB info
PDB header: lyaseChain: B: PDB Molecule: uncharacterized protein yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
19 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . .
. . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
W P E R L V L A K S C G F D F V E M S V D E T D E R L S R L D W S A A Q R T S L V A A M I E T G .
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V G I P S M C L S A H R R F P F G S R D E A V R E R A R E
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
T A A L I D D L I K A G V D G L F F L G S G G E F S Q .
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L G A E E R K A I A R F A I D H V D R R V P V L I G T G G T N .
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A R
Template Known Secondary structure  
T T S S S T T T T G G G . . . . S T T S S S S . . . . . . . . . . . . . . . .
Template Predicted Secondary structure  
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Template SS confidence  
   
36 . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . .
. . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . .
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96 . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
I M S K A I R L A R D L G I R T I Q L A G Y D V Y Y E D H D E G T R Q R F A E G L A W A V E Q A A A S Q V M L A V E I M D T A F M N S I S K W K K W D E M L A
Query Conservation  
                                                                                                                               
Alig confidence  
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Template Conservation  
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Template Sequence  
E T I E L S Q H A Q Q A G A D G I V V I N P Y Y W K V S E A N .
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L I R Y F E Q V A D S V .
T L P V M L Y N F P A L T G Q D L T P A L V K T L A D S R S
Template Known Secondary structure  
T S S S S . . . . . T . S S S S T
Template Predicted Secondary structure  
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Template SS confidence  
   
96 . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . .
. . . 130 . . . . . . . .
. 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]