Job Description P37679 Confidence 100.00% Date Thu Jan 5 11:56:53 GMT 2012 Rank 15 Aligned Residues 265 % Identity 16% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		5	.	.	.	.	10	.	.	.	.	.													.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		Q	L	G	I	Y	E	K	A	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	D	L	S	W	P	E	R	L	V	L	A	K	S	C	.	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.															.							.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		E	F	G	A	G	L	W	H	F	A	N	Y	I	D	R	Y	A	V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	Y	V	D	.	.	.	.	.	.	.	.	.	L	P	Y	P	F	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G
Template Known Secondary structure							G	G	G	G	S					S	S		T	T		S	S																S	S						.	.	.	.	.	.	.	.	.				S		S	T	T														T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.										.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		72	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure							.	.	.	.																																												.	.	.	.
Query SS confidence							.	.	.	.																																												.	.	.	.
Query Sequence		M	C	L	S	A	.	.	.	.	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	.	.	.	.	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A
Query Conservation							.	.	.	.																																												.	.	.	.
Alig confidence							.	.	.	.																																												.	.	.	.
Template Conservation
Template Sequence		I	T	P	E	I	Y	L	Q	K	W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N
Template Known Secondary structure						T	T	S	G	G	G	T	T		S	T	T		S	S																						T		S							T	T				S	S	T	T	S	S																			T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																																																.	.
Query SS confidence															.	.	.																																																.	.
Query Sequence		A	A	S	Q	V	M	L	A	V	E	I	M	D	.	.	.	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	I	D	.	.	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G
Query Conservation															.	.	.																																																.	.
Alig confidence															.	.	.																																																.	.
Template Conservation
Template Sequence		P	D	V	K	F	A	I	E	Y	K	P	R	E	P	R	V	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I	G	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	G	E	S	P	A	D	S	A	Q	L	I	I	D	R	G	R	L	F	G	X	D	V	N	D	N	L	R	G	W	D
Template Known Secondary structure		T	T	S								S		S	S	S	S			S	S		S												T		T	T													T	T													T	T							B		B			S	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	.	V	D	F	V	G	I	F	K	T	L	H	K	L	N	Y	R	G	S	F	L	I	E	M	W	T	E	K	A	K	E	P	V	L	E	I	I	Q	A	R	R	W	I	E	A	R	M	Q	E	A	G	F	I
Query Conservation																	.
Alig confidence			.	.	.	.	.	.									.																								.
Template Conservation			.	.	.	.	.	.																																	.
Template Sequence		D	.	.	.	.	.	.	D	L	V	V	G	T	V	H	X	T	E	I	F	E	F	F	Y	V	L	K	I	N	N	W	Q	G	V	W	Q	L	D	Q	.	F	P	F	R	E	N	H	V	E	A	A	Q	L	S	I	R	F	L	K	H	I	Y	R	A	L	D	K	L
Template Known Secondary structure			.	.	.	.	.	.		B		T	T	S	S															T	T										.			T	T	S																							S
Template Predicted Secondary structure			.	.	.	.	.	.																																	.
Template SS confidence
		239							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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