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Job DescriptionP37679
Confidence100.00%DateThu Jan 5 11:56:53 GMT 2012
Rank10Aligned Residues258
% Identity20%Templatec3ju2A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSR
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Template Sequence  LSINLATIREQCGFAEAVDICLKHGITAIAPWRDQV. . . . . . . . . AAIGLGEAGRIVRANGLKLTGLCRGGF. . . . FPAP
Template Known Secondary structure  GGGGTTT

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   6...10.........20.........30.........40. ........50.........60........ .70..
 
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Query Sequence  DEAVRERAREIMSKAIRLARDLGIRTIQLAGYDV. YYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDT. . . . . . A
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Template Sequence  DASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRA
Template Known Secondary structure  STBS

B


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GGGTTTTB
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   159160.........170.........180.........190.........200. ........210.........220.........230.......
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Query Sequence  FMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLG. IDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGCVDFV
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Template Sequence  CVNTLGQALDICETLG. PGVGVAIDVYHVWWDPDLANQIARAGKMKAILAHHICDWLVPTK. . DMLTDRGMMGDGVIDLK
Template Known Secondary structure  S



.TTTT
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   153......160........ .170.........180.........190.........200.........210.. .......220.........
 
   238.240.........250.........260. ........270.........
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Query Sequence  GIFKTLHKLNYRGSFLIEMWTEKA. . . KEPVLEIIQARRWIEARM
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Template Sequence  GIRRRIEAAGFHGAQEVEIFSADNWWKRPADEVIATCVERYRNCC
Template Known Secondary structure  TT






BTTTGGGS
T
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   230.........240.........250.........260.........270....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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