Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence82.55%DateThu Jan 5 11:56:53 GMT 2012
Rank151Aligned Residues200
% Identity17%Templatec3hpxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644)
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.... .....70.........80.........90......
Predicted Secondary structure 
















....















Query SS confidence 











































. . . .































Query Sequence  ERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIE. . . . TGVGIPSMCLSAHRRFPFGSRDEAVRERAREI
Query Conservation       
   

  


                            .... 

 
                
   
      
Alig confidence 














.........



















....











.................


Template Conservation   

  
   

  

.........

 
  
  
 
 
  
         
 
  
   
.................   
Template Sequence  RMFDLLVRMGYKEIE. . . . . . . . . VGFPSASQTDFDFVREIIEQGAIPDDVTIQVLTQCR. . . . . . . . . . . . . . . . . PEL
Template Known Secondary structure  T
S.........
TTT
TT
S
TT
S
.................
Template Predicted Secondary structure 



.........















.................
Template SS confidence 















































































   97..100.........110. ........120.........130.........140....... ..150
 
   97..100.........110.........120. ........130.........140...... ...150.........160.......
Predicted Secondary structure 









......




...








Query SS confidence 
























. . . . . .
























. . .




















Query Sequence  MSKAIRLARDLGIRTIQLAGYDVYY. . . . . . EDHDEGTRQRFAEGLAWAVEQAAAS. . . QVMLAVEIMDTAFMNSISKWK
Query Conservation      
  
  

   
    
    ......              
      
   ...

 
 

              
Alig confidence 
























......
























...







.











Template Conservation 
  
 

  

    
 
  
 

 
    
  
  
 
      
  
           
 
 
  .

  
       
Template Sequence  IERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSP. ESYTGTELEYAK
Template Known Secondary structure  TTT
S

TT


STTS.TGGGS
Template Predicted Secondary structure 














.






Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210....... ..220.........
 
   168.170....... ..180.........190.........200..... ....210....... ..220.
Predicted Secondary structure 

.........



















.......





..........



Query SS confidence 









. . . . . . . . .



























. . . . . . .











. . . . . . . . . .



Query Sequence  KWDEMLASPW. . . . . . . . . FTVYPDVGNLSAWGNDVPAELKLGIDRI. . . . . . . AAIHLKDTQPVT. . . . . . . . . . GQSP
Query Conservation   

       .........     
  
                  
.......  

  
     ..........    
Alig confidence 









.........








..
















.......











..........



Template Conservation   
      
          
 
 



 ..
 
      
  
         
 
  
 


 










 


  
Template Sequence  QVCDAVGEVIAPTPERPIIFNLPATVEM. . TTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADR
Template Known Secondary structure 


SSS
SS

..S
STTGGGB
TTS
TT

Template Predicted Secondary structure 










..
















Template SS confidence 















































































   230.........240.........250....... ..260.........270.........280.........290.........300.......
 
   222.......230. ........240.........
Predicted Secondary structure 






..







Query SS confidence 









. .

















Query Sequence  GQFRDVPFGE. . GCVDFVGIFKTLHKLNYR
Query Conservation          

..
 

   
   
   

 
Alig confidence 









..

















Template Conservation 

 

 








 

 
   
   
  
Template Sequence  IEGCLFGNGERTGNVCLVTLGLNLFSRGVD
Template Known Secondary structure  BGGG
SSTT
B
BTTT

Template Predicted Secondary structure 











Template SS confidence 





























   308.310.........320.........330.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions