Job Description P37679 Confidence 35.69% Date Thu Jan 5 11:56:53 GMT 2012 Rank 400 Aligned Residues 129 % Identity 11% Template c3gh7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase; PDBTitle: crystal structure of beta-hexosaminidase from paenibacillus2 sp. ts12 in complex with galnac Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	R	Q	I	D	L	A	S	Q	Y	K	I	N	K	F	H	M	H	L	S	D	D	Q	G	W	R	I	E	I	K	S	W	P	D	L	I	E	I	G	S	K	G	Q	V	G	G	G	P	G	G	Y	Y	T	Q	E	Q	F	K	D	I	V	S	Y	A	A	E	R	Y	I	E	V	I	P	E	I	D	M	P	G
Template Known Secondary structure											T	T	T									B		S	S		B		B			T	T	S	T					T	T	T	S			G	G	G						B														T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.																								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		R	R	F	P	F	G	S	R	D	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	.	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.								.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		H	T	N	A	A	L	A	S	Y	G	E	L	N	P	D	G	K	R	K	A	M	R	T	D	T	A	V	G	Y	S	T	L	M	P	R	A	E	I	T	Y	Q	F	V	E	D	V	I	S	E	L	A	A	I	S	P	S	P	Y	I	H	L	.	.	.	.	.	G	G	D	E	S	N	A	T	S	A	A	D	Y	D
Template Known Secondary structure		S									G	G	G	S	T	T	S								S				S						T	T																					S	S					.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	F	G	R	V	T	A	I	A	N	S	Y	G	K	K	V	V	G
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions