Job Description P37679 Confidence 40.54% Date Thu Jan 5 11:56:53 GMT 2012 Rank 379 Aligned Residues 114 % Identity 15% Template c3faxA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:reticulocyte binding protein; PDBTitle: the crystal structure of gbs pullulanase sap in complex with2 maltotetraose Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	.	.	.	.	.	.	.	.	.	A	Q	R	T	S	L	V	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	E	K	L	D	Y	L	Q	K	L	G	V	T	H	I	Q	L	L	P	V	L	S	Y	F	Y	V	N	E	M	D	K	S	R	S	T	A	Y	T	S	S	D	N	N	Y	N	W	G	Y	D	P	Q	S	Y	F	A	L	S	G	M	Y	S	E	K	P	K	D	P	S	A	R	I	A	E	L	K	Q	L	I	H
Template Known Secondary structure					T								T		S					S			B		B	S	S		B	T	T							S			S	S	S		S				S		S	B	S		S	S	S	B		G	G	G		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		61	.	.	.	.	.	.	.	.	70	.		.	.	.	.																												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure													.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	I	E	T	G	V	G	I	P	S	.	M	C	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I
Query Conservation													.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		D	I	H	K	R	G	M	G	V	I	L	D	V	V	Y	N	H	T	A	K	T	Y	L	F	E	D	I	E	P	N	Y	Y	H	F	M	N	E	D	G	S	P	R	E	S	F	G	G	G	R	L	G	T	T	H	A	M	S	R	R	V	L	V	D	S	I	K	Y	L	T	S	.	.	.	E	F	K	V	D	G	F
Template Known Secondary structure						T	T										S			S		T					T	T	S	T	T	T	S	B		B		T	T	S		B		B	S	S	S	S	B		B		T	T	S																	.	.	.		S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.				.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		R	.	.	.	.	F	D	M	M	G	D	H	D	A	A	A	I	E	L	A	Y	K	E	A	K	A	I
Template Known Secondary structure			.	.	.	.		T	T	G	G	G	S	B
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		800					.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions