Job Description P37679 Confidence 64.85% Date Thu Jan 5 11:56:53 GMT 2012 Rank 260 Aligned Residues 148 % Identity 10% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	G	N	E	I	L	L	K	A	H	K	E	G	Y	G	V	G	A	F	N	F	.	.	.	.	.	.	.	.	.	.	.	V	N	F	E	M	L	N	A	I	F	E	A	G	N	E	E	N	S	P	L	F	.	.	.	.	.	.	.	.	.	.	.	I	Q	A	S	E	G	A	I	K	Y	M	G	I	D	M
Template Known Secondary structure															T									.	.	.	.	.	.	.	.	.	.	.	S	S															T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.												.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		97	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.
Predicted Secondary structure															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		M	S	K	A	I	R	L	A	R	D	L	G	I	.	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	.	M	D	T	A
Query Conservation															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		A	V	G	M	V	K	I	M	C	E	R	Y	P	H	I	P	V	A	L	H	L	D	H	G	T	T	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A	E	L	G	R	L	M	G
Template Known Secondary structure													S	T	T	S											S											T		S							T	T	S																			T	T								S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	V	N	P	K	E	A	E	Q	F	V	K	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H
Template Known Secondary structure																			S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions