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Job DescriptionP37679
Confidence99.56%DateThu Jan 5 11:56:53 GMT 2012
Rank40Aligned Residues213
% Identity18%Templatec3bzjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uv endonuclease; PDBTitle: uvde k229l
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30........ .40.........50.........60.........70.........80.........90..
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Query Sequence  WPERLVLAKSCGFDFVEMSV. . . . . . DETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRER
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Template Sequence  LERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLS. . . MHPGQYVNPGSPDPEVVER
Template Known Secondary structure  TT



TTSSTTTTSTT

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   42.......50.........60.........70.........80.........90......... 100.........110........
 
   93......100......... 110.........120.........130.........140.........150.........160.........170
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Query Sequence  AREIMSKAIRLARDLGI. . RTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWD
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Template Sequence  SLAELRYSARLLSLLGAEDGVLVLHLGGAYGE. . . . . . KGKALRRFVENLRGEEEVLRYLALENDER. . LWNVEEVLKAA
Template Known Secondary structure  TT
TT




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   119120.........130.........140.........150 .........160.........170......... 180.........190
 
   171........180.........190. ........200. ........210.........220.........230.........240...
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Query Sequence  EMLASPWFTVYPDVGNLSAWG. . NDVPAELKLG. . . . . IDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGCVDFVGIFKTL
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Template Sequence  EALG. . . VPVVVDTLHHALNPGRLPLEEALRLAFPTWRGRPLVHLASQDPKKRPGA. . . . . . . . . . HAFRVTREDWERLL
Template Known Secondary structure  T...

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   191... .....200.........210.........220.........230.........240... ......250.......
 
   244.....250.....
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Query Sequence  HKLNYRGSFLIE
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Template Sequence  SALPGPADVMVE
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   258.260.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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