Job Description P37679 Confidence 99.08% Date Thu Jan 5 11:56:53 GMT 2012 Rank 41 Aligned Residues 234 % Identity 15% Template c3bwwA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:protein of unknown function duf692/cog3220; PDBTitle: crystal structure of a duf692 family protein (hs_1138) from2 haemophilus somnus 129pt at 2.20 a resolution Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	Y	E	K	A	L	A	K	D	L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R
Query Conservation
Alig confidence					.	.	.							.																					.	.	.	.	.	.																																								.	.
Template Conservation					.	.	.							.																					.	.	.	.	.	.																																								.	.
Template Sequence		A	G	L	.	.	.	G	Y	R	R	D	L	.	A	E	G	F	L	Q	L	R	N	N	D	R	I	Q	F	X	E	I	A	P	.	.	.	.	.	.	E	N	W	I	K	X	G	G	F	A	R	Y	Q	F	D	K	V	A	E	K	I	P	I	L	I	H	G	L	S	L	S	L	G	G	Q	A	P	L	D	.	.
Template Known Secondary structure					.	.	.				G	G	G	.								S	S	S	S	S	S								.	.	.	.	.	.					T													T	T	T	S					B		S				T	T		S	S				.	.
Template Predicted Secondary structure					.	.	.							.																					.	.	.	.	.	.																																								.	.
Template SS confidence
		5	.	.				.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	.	.	.	N	S
Query Conservation																																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																			.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	E	L	L	S	S	I	K	A	X	I	K	Q	Y	N	T	P	F	F	S	D	H	L	S	F	L	L	P	X	P	F	T	D	E	A	V	K	H	T	A	A	R	I	R	E	V	Q	D	F	L	.	.	.	E	I	Q	I	S	V	E	N	T	S	Y	Y	L	H	S	E	T	S	T
Template Known Secondary structure		.	.	.	.	.	.	.	.														T	T								S						B																						.	.	.	T	S										S		B		T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																			.	.	.
Template SS confidence
										73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.		.											.
Query SS confidence																														.	.	.	.		.											.
Query Sequence		I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	.	.	.	.	G	.	N	D	V	P	A	E	L	K	L	G	.	I	D	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F
Query Conservation																														.	.	.	.		.											.
Alig confidence																														.	.	.	.		.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	N	E	V	E	F	L	N	A	I	V	Q	E	A	N	C	G	I	H	L	D	V	N	N	I	Y	V	N	A	V	N	H	G	L	L	D	P	H	V	F	I	D	N	V	D	L	K	R	V	N	Y	I	H	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	W
Template Known Secondary structure		S														T																				S									S		G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																						.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	I	F	K	T	L	H	K	L	N	Y	R	G	S	F	L	I	E	M	W	T	E	K	A	K	E	P	V	L	E	I	I	Q	A	R	R	W	I	E	A	R	M	Q	E	A	G	F
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		D	L	L	E	Y	T	Y	A	R	L	S	H	X	P	P	T	L	L	E	.	R	F	P	P	F	E	K	L	C	K	E	V	D	I	I	H	Q	L	Q	Q	K	Y	V	K	K	R	G	L
Template Known Secondary structure									T	T		S	S	B							.																											T
Template Predicted Secondary structure																					.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions