Job Description P37679 Confidence 99.96% Date Thu Jan 5 11:56:53 GMT 2012 Rank 34 Aligned Residues 254 % Identity 19% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		23	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	V	L	A	K	S	C	.	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I
Query Conservation									.
Alig confidence									.													.	.	.																																			.	.
Template Conservation																						.	.	.																																			.	.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	.	.	.	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	.	.	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I
Template Known Secondary structure							T	S	T	T										S	S	.	.	.		T	T	S																	T	T													.	.						T		T	T
Template Predicted Secondary structure																						.	.	.																																			.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																																							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A
Template Known Secondary structure								T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		144	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																						.											.	.
Query SS confidence														.	.	.	.	.	.	.	.																																						.											.	.
Query Sequence		A	A	S	Q	V	M	L	A	V	E	I	M	.	.	.	.	.	.	.	.	D	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	.	D	V	P	A	E	L	K	L	G	I	.	.	D	R	I	A	A	I	H	L	K	D
Query Conservation														.	.	.	.	.	.	.	.																																						.											.	.
Alig confidence														.	.	.	.	.	.	.	.																																						.											.	.
Template Conservation
Template Sequence		E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L	K	R	N	R	I	N	F	M	H	T	R	N
Template Known Secondary structure					T									S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																												.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.											.	.	.	.	.	.	.
Query Sequence		T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F	V	G	I	F	K	T	L	H	K	L	N	Y	R	G	S	F	L	I	.	.	.	.	E	M	W	T	E	K	A	K	E	P	.	.	.	.	.	.	.	V	L	E	I	I	Q	A	R	R	W	I	E	A	R	M	Q	E
Query Conservation																																												.	.	.	.											.	.	.	.	.	.	.
Alig confidence									.	.																																		.	.	.	.											.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		V	T	A	G	A	W	G	.	.	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R	P	D	H	G	R	R	I	W	G	D	Q	T	K	T	P	G	Y	G	L	Y	D	R	A	L	G	A	T	Y	F	N	G	L	Y	E	A	N	M	R	A
Template Known Secondary structure						T	T		.	.						S	S	G	G	G	S	S													T	T												B		T	T					S	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		282	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		368	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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