Job Description P37679 Confidence 88.64% Date Thu Jan 5 11:56:53 GMT 2012 Rank 95 Aligned Residues 195 % Identity 18% Template c2yswB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 Resolution 2.25 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		K	D	L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	.
Query Conservation																																																																																	.
Alig confidence																														.	.	.	.	.	.																																														.
Template Conservation																														.	.	.	.	.	.
Template Sequence		D	D	T	N	F	S	E	N	L	K	K	A	K	E	K	G	A	D	I	V	E	L	R	V	D	Q	F	S	.	.	.	.	.	.	D	T	S	L	N	Y	V	K	E	K	L	E	E	V	H	S	Q	G	L	K	T	I	L	T	I	R	S	P	E	E	G	G	R	E	V	K	N	R	E	E	L	F	E	E	L	S
Template Known Secondary structure			S	T	T											T	T		S						G	G	G		S	.	.	.	.	.	.																	T	T										G	G	G	T					T	T									G
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
														94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.																										.	.	.	.	.								.	.	.	.	.	.
Template Conservation																																				.	.																										.	.	.	.	.								.	.	.	.	.	.
Template Sequence		P	L	S	D	Y	T	D	I	E	L	S	S	R	G	L	L	V	K	L	Y	N	I	T	K	E	A	G	K	K	L	I	I	S	Y	.	.	H	N	F	E	L	T	P	P	N	W	I	I	R	E	V	L	R	E	G	Y	R	Y	G	G	I	.	.	.	.	.	P	K	I	A	V	K	A	.	.	.	.	.	.	N
Template Known Secondary structure		G	G	S	S						T	T															T	T								.	.			S	S																		T	T	S		.	.	.	.	.								.	.	.	.	.	.	S
Template Predicted Secondary structure																																				.	.																										.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.							.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	I	D	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F	V	G	I	F	K
Query Conservation
Alig confidence																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	E	D	V	A	R	L	L	C	I	S	R	Q	V	E	G	E	K	I	L	.	.	I	S	M	G	D	Y	G	K	I	S	R	L	A	G	Y	V	F	G	S	V	I	T	Y	C	S	L	E	K	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	G	Q	I	P	L	E	E	M	V	E
Template Known Secondary structure		S												T	T	S		S		B			.	.				T	T	G	G	G	G					G	G	G	G	T	B						B	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T			B
Template Predicted Secondary structure																							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																200	.	.	.	.	.	.	.	.	.	210	.
		242	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	H	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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