 |
| Job Description | P37679 | | Confidence | 35.69% | Date | Thu Jan 5 11:56:53 GMT 2012 |
| Rank | 401 | Aligned Residues | 76 |
| % Identity | 12% | Template | c2y8kA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:carbohydrate binding family 6; |
PDBTitle: structure of ctgh5-cbm6, an arabinoxylan-specific xylanase.
|
| Resolution | 1.47 Å |
|
| | |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |
|
|
|  | | |  |
|
|
|
|
|
|
|
|
|
|
| | | | | . | . | | | | | | | | | | | | | | | | |
|
| | | | | | | |
|
|
| . | . |
|
|
|
|
| | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | K | A | I | R | L | A | R | D | L | G | I | R | T | I | Q | L | A | G | Y | D | V | Y | Y | E | D | H | D | E | G | T | R | . |
. |
Q | R | F | A | E | G | L | A | W | A | V | E | Q | A | A | A | S | Q | V | M | L | A | V | E | I | M | D | T | . |
. |
A | F | M | N | S | I | S | K | W | K | K | W | D | E | M | L |
| Query Conservation | |
| | |
| | |
| | |
|
| | | |
| | | | |
| | | | | | | | | | | | | . | . | | | | | | |
| | | | | | |
| | | |
|
| |
| |
|
| | | | | . | . | | | | | | | | | | | |
|
| | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | | | | |
| |
| |
|
|
| | | | | | | | | | | | |
| | | | | | | | | | |
|
| |
|
| | |
| | | |
|
|
|
|
|
|
| |
| | | | | | | | | | | | | | | | | | | | |
| Template Sequence | |
Y | D | Q | I | A | R | V | K | E | L | G | F | N | A | V | H | L | Y | A | E | C | F | D | P | R | Y | P | A | P | G | S | K | A | P | G | Y | A | V | N | E | I | D | K | I | V | E | R | T | R | E | L | G | L | Y | L | V | I | T | I | G | N | G | A | N | N | G | N | H | N | A | Q | W | A | R | D | F | W | K | F | Y |
| Template Known Secondary structure | |
| | | | G | G | G | G | G | G | T |
|
| | | | | | | | |
|
| T | T | T | T | S | T | T |
|
|
| T | T | T | T | | | | | | | | | | | | | | | T |
| | | | | | | |
| T | T |
| T | T |
|
|
| | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
|
|
| | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | | | | |
|
|
| | | | | | |
|
|
|
|
|
|
|
|
| | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
