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Job DescriptionP37679
Confidence64.46%DateThu Jan 5 11:56:53 GMT 2012
Rank266Aligned Residues114
% Identity10%Templatec2vfwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140. ........150.........160.....
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Query Sequence  AVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVE. . QAAASQVMLAVEIMDTAFMNSISK
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Template Sequence  YGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPAR
Template Known Secondary structure  T
S

BTTGGGS
T
TTT

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GGGS
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   56...60.........70.........80.........90.........100.........110.........120.........130.....
 
   166...170.........180.........190.........200.
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Query Sequence  WKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLG
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Template Sequence  RLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRAL
Template Known Secondary structure  TS
SS
S

SB
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   136...140.........150.........160.........170.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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