Job Description P37679 Confidence 52.37% Date Thu Jan 5 11:56:53 GMT 2012 Rank 325 Aligned Residues 166 % Identity 14% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	.	.	.	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E
Query Conservation																																																		.	.	.
Alig confidence																													.	.	.	.																		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	Y	.	.	.	.	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I	L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D
Template Known Secondary structure												T	T		S					S	S	T	T	T	T	G	G	G	.	.	.	.	S																	T	T	S	S									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S
Query Conservation
Alig confidence																												.	.				.	.	.																.																											.	.
Template Conservation																												.	.				.	.	.																.																											.	.
Template Sequence		E	A	V	A	L	A	K	D	A	E	A	A	G	A	D	A	L	L	L	A	P	V	S	Y	T	P	.	.	L	T	Q	.	.	.	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	.	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	F	S	D	E	L	L	V	R	L	A	Y	.	.	I	P
Template Known Secondary structure														T		S									S	S		.	.				.	.	.															S	.	S								G	G	G	T														T	.	.	S	T
Template Predicted Secondary structure																												.	.				.	.	.																.																											.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	I	D	R	I	A	A	I	H	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	R	A	I	K	X	P	L	P	A	D	A	D	Y	A	G	E	L	A	R	L	R	P	K	L	S	D	D	F	A	I	G	Y	S	G	D
Template Known Secondary structure		T										T	T											T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions