Job Description P37679 Confidence 89.84% Date Thu Jan 5 11:56:53 GMT 2012 Rank 91 Aligned Residues 126 % Identity 10% Template c2p3eA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus Resolution 1.99 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																	.																																	.
Query SS confidence																	.																																	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	.	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	.	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I
Query Conservation																	.																																	.
Alig confidence																	.								.	.	.	.	.																					.													.	.	.	.
Template Conservation																									.	.	.	.	.																																		.	.	.	.
Template Sequence		L	D	V	L	N	E	I	A	G	K	L	G	K	K	A	R	I	A	I	R	V	N	P	.	.	.	.	.	S	K	F	G	V	D	I	R	E	A	Q	K	E	Y	E	Y	A	S	K	L	E	N	L	E	I	V	G	I	H	C	H	I	G	.	.	.	.	S	Q	I	L	D	I	S	P	Y	R	E	A	V	E	K
Template Known Secondary structure													T												.	.	.	.	.			S				G	G	G										T		T	T												.	.	.	.	S	S	B	S	S		T
Template Predicted Secondary structure																									.	.	.	.	.																																		.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		V	V	S	L	Y	E	S	L	T	Q	K	G	F	D	I	K	Y	L	D	I	G	G	G	L	G	I	K	Y	K	P	E	D	K	E	P	A	P	Q	D	L	A	D	L	L	K	D	L	L	V	.	K	A	K	I	I	L	E	P
Template Known Secondary structure												T	T												B					S	T	T														T	T	T			.		S
Template Predicted Secondary structure																																																			.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions