Job Description P37679 Confidence 71.80% Date Thu Jan 5 11:56:53 GMT 2012 Rank 224 Aligned Residues 133 % Identity 16% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Sequence		M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	.	.	.	.	.	.	.	.	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N	E	R	R	.	.	.	.	.	.	.	.
Template Known Secondary structure													T		S						G	G	G		S	.	.	.	.	.	.	.	.	S															S	S								B	G	G	G	T	S	S	B		S							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	.	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A
Template Known Secondary structure										T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T	.				S	S										S	S																		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.														.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		179	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions