Job Description P37679 Confidence 33.76% Date Thu Jan 5 11:56:53 GMT 2012 Rank 413 Aligned Residues 132 % Identity 13% Template c2o0tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: the three dimensional structure of diaminopimelate decarboxylase from2 mycobacterium tuberculosis reveals a tetrameric enzyme organisation Resolution 2.33 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R	R	V	F	A	T	D	H	L	R	L	V	G	L	H	S	H	I	G	.	.	.	.	S	Q
Template Known Secondary structure													T												S						T						S	S			S	S	S	S			T	T	T	T													S	S												.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																				.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	.	.	.	.	.	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	.	.	.	.	.	.	.	.	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L
Query Conservation																				.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	G	G	L	G	I	S	Y	L	P	S	D	D	P	P	P	I	A	E	L	A	A	K	L	G	T	I	V	S	D	E	S	T	A	V	G	L	P	T	P	K	L
Template Known Secondary structure					S																										S	T	T										B				S	S	T	T																								T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		151	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	E	P
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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