Job Description P37679 Confidence 21.87% Date Thu Jan 5 11:56:53 GMT 2012 Rank 483 Aligned Residues 132 % Identity 13% Template c1tufA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	.	V	E	M	S	V	D	E	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G
Query Conservation																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	G	L	D	V	E	S	G	I	A	M	K	A	I	K	M	A	L	E	M	E	Y	V	N	V	V	G	V	H	C	H	I	G	.	.	.	.	S	Q
Template Known Secondary structure													T								B							T	T	T	S										S	S		S			T	T	T	T											T		S	S												.	.	.	.	S	S
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																										.	.
Query SS confidence																																							.	.	.	.																										.	.
Query Sequence		S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	.	.	.	.	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	.	.	S	Q	V	M	L	A	V	E	I
Query Conservation																																							.	.	.	.																										.	.
Alig confidence																																							.	.	.	.																										.	.
Template Conservation
Template Sequence		L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L	K	E	E	G	I	E	I	E	D	V	N	L	G	G	G	L	G	I	P	Y	Y	K	D	K	Q	I	P	T	Q	K	D	L	A	D	A	I	I	N	T	M	L	K	Y	K	D	K	V	E	M	P	N	L	I	L	E	P
Template Known Secondary structure		B																						T	T	T				S								B					S	S	S	S																		T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions