Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence44.99%DateThu Jan 5 11:56:53 GMT 2012
Rank362Aligned Residues133
% Identity10%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  PERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERAREIMSK
Query Conservation        
   

  


                             

 
                
   
         
Alig confidence 

























.........

























.............





Template Conservation     
  
   
   
 
         .........    
  

  
  
           .............      
Template Sequence  VHDLKNAYQAGARVVRVATHCTEADV. . . . . . . . . SKQHIEYARNLGMDTVGFLMMSHMIP. . . . . . . . . . . . . AEKLAE
Template Known Secondary structure  T

TT
GGG.........GTT
TGGGS
.............
Template Predicted Secondary structure 



.........









.............
Template SS confidence 















































































   96...100.........110.........120. ........130.........140....... ..150...
 
   100.........110.........120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  AIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFT
Query Conservation   
  
  

   
    
                  
      
   

 
 

               

         
Alig confidence 














...






















....


































Template Conservation          


 
 
... 

 
   
     

  
    ....     
  
 


 


 

 



 


  

 
Template Sequence  QGKLMESYGATCIYM. . . ADSGGAMSMNDIRDRMRAFKAVL. . . . KPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDAS
Template Known Secondary structure  T
S...
TTS


S....
TTS
B
TTS
TT

B
Template Predicted Secondary structure 



...








....












Template SS confidence 















































































   154.....160........ .170.........180.........190. ........200.........210.........220......
 
   180.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  VY
Query Conservation    
Alig confidence 

Template Conservation 
 
Template Sequence  LA
Template Known Secondary structure  GG
Template Predicted Secondary structure 

Template SS confidence 

   227.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions