Job Description P37679 Confidence 88.43% Date Thu Jan 5 11:56:53 GMT 2012 Rank 97 Aligned Residues 116 % Identity 16% Template c1jp3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase Resolution 1.80 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	W	A	K	K	Q	G	K	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	H	K	A	G	A	K	S	V	R	R	A	V	S	F	A	A	N	N	G	I	E	A	L	T	L	Y	A	F	S	X	.	.	.	.	.	.	.	.	.	.	E	L	F	V	W	A	L	D	S
Template Known Secondary structure									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T		S										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.																		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.											.	.	.	.	.	.	.	80	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	K	S	L	H	R	H	N	V	R	L	R	I	I	G	D	T	S	R	F	N	S	R	L	Q	E	R	I	R	K	S	E	A	L	T	A	G	N	T	G	L	T	L	N	I	A	A	N	Y	G	G	R	W	D	I	V	Q	G	V	R	Q	L
Template Known Secondary structure									T	T							S			T	T	S																T	T			S							S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions