Job Description P76250 Confidence 99.71% Date Wed Jan 25 15:21:06 GMT 2012 Rank 24 Aligned Residues 207 % Identity 13% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		R	Q	V	P	Q	G	M	L	R	I	I	S	S	F	G	F	G	R	Q	V	V	A	P	A	L	L	A	L	A	K	A	Y	P	Q	L	E	L	R	F	D	V	E	D	R	L	V	D	L	V	N	E	G	V	D	.	.	.	.	L	D	I	R	I	G	D	D	I	A	P	N	L	I	A	R	K	L	A	T	N	Y
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.
Template Conservation
Template Sequence		T	N	D	T	S	G	V	L	T	I	A	T	T	H	T	Q	A	R	Y	S	L	P	E	V	I	K	A	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	G	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	I	A	S	E	R	L	S	N	D	P	Q	L	V	A	F	P	W	F	R	W	H
Template Known Secondary structure			T	T																	T													T	T																				T	S		S					S	S	S	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	C	A	S	P	E	F	I	A	Q	H	G	A	P	K	H	L	T	D	L	S	A	L	P	C	L	V	I	K	E	R	D	H	P	F	G	V	W	Q	L	R	N	K	E	G	P	H	A	I	K	V	T	G	P	L	S	S	N	H	G	E	I	V	H	Q	W	C	L	D	G	Q	G	I	A	L	R	S	W
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S	P	L	T	L	E	S	I	A	K	W	P	L	I	T	Y	R	Q	G	I	T	.	.	G	R	S	R	I	D	D	A	F	A	R	K	G	L	L	A	D	I	V	L	S	A	Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	I	G	L	V	A	E
Template Known Secondary structure								T	T		G	G	G	T	S	S	S							T	T	S							T	T	S	T	.	.	T											T	T										S	S											T	S							G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	V	S	E	N	I	A	S	G	H	L	V	Q	V	L	P	E	Y	Y	Q	P	A	N	V	W	A	V	Y	V	S	R	L	A	T	S	A	K	V	R	I	T	V	E	F	L	R	Q	Y	F	A	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	S	G	E	Q	E	E	E	N	L	I	R	L	D	T	R	H	L	F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	Q	R	N	Y	V	W	R	F	L	E	L	C	N	A	G	L	S	V	E
Template Known Secondary structure		G	G	G	S	T	T			T	T							T	T	T	S											T	T																S	S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions