Job Description P76250 Confidence 94.00% Date Wed Jan 25 15:21:06 GMT 2012 Rank 147 Aligned Residues 66 % Identity 23% Template d1stza1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Heat-inducible transcription repressor HrcA, N-terminal domain Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.											.	.																												.	.
Query SS confidence																					.	.	.	.	.	.	.											.	.																												.	.
Query Sequence		M	N	N	L	P	L	L	N	D	L	R	V	F	M	L	V	A	R	R	.	.	.	.	.	.	.	A	G	F	A	A	V	A	E	E	L	.	.	G	V	S	P	A	F	V	S	K	R	I	A	L	L	E	Q	T	L	N	V	V	L	L	H	R	T	T	.	.	R	R	V	T	I	T	E	E	G	E	R	I	Y
Query Conservation																					.	.	.	.	.	.	.											.	.																												.	.
Alig confidence				.	.	.	.														.	.	.	.	.	.	.											.	.																	.	.	.									.	.
Template Conservation				.	.	.	.																																																	.	.	.
Template Sequence		L	N	.	.	.	.	D	R	Q	R	K	V	L	Y	C	I	V	R	E	Y	I	E	N	K	K	P	V	S	S	Q	R	V	L	E	V	S	N	I	E	F	S	S	A	T	I	R	N	D	M	K	K	L	E	Y	.	.	.	L	G	Y	I	Y	Q	P	H	T	S	A	G	R	I	P	T	D	K	G	L	R	F	Y
Template Known Secondary structure				.	.	.	.																			S		B									S				S															.	.	.	T	T	S					S	S		S		B
Template Predicted Secondary structure				.	.	.	.																																																	.	.	.
Template SS confidence
		15	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		70	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	E	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions