Job Description P76250 Confidence 90.15% Date Wed Jan 25 15:21:06 GMT 2012 Rank 186 Aligned Residues 85 % Identity 12% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.
Predicted Secondary structure																	.	.	.																																				.	.	.	.	.	.	.											.	.	.
Query SS confidence																	.	.	.																																				.	.	.	.	.	.	.											.	.	.
Query Sequence		L	L	N	D	L	R	V	F	M	L	V	A	R	R	A	.	.	.	G	F	A	A	V	A	E	E	L	G	V	S	P	A	F	V	S	K	R	I	A	L	L	E	Q	T	L	N	V	V	L	L	H	R	T	.	.	.	.	.	.	.	T	R	R	V	T	I	T	E	E	G	.	.	.	E	R	I	Y	E	W	A
Query Conservation																	.	.	.																																				.	.	.	.	.	.	.											.	.	.
Alig confidence																	.	.	.																										.	.	.								.	.	.	.	.	.	.											.	.	.
Template Conservation																																													.	.	.
Template Sequence		N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	.	.	.	L	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H
Template Known Secondary structure																S	S												T																.	.	.	T	T	S							T	T		S	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	L	Q	D	V	G	Q	M	M	D	E	L	S	D	V	R	Q	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	I	A	K	T	Y	E	D	L	K	K	L	E	E	K	C	N	E	E	E
Template Known Secondary structure																		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions