Job Description P76250 Confidence 100.00% Date Wed Jan 25 15:21:06 GMT 2012 Rank 6 Aligned Residues 284 % Identity 14% Template c3ispA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator PDBTitle: crystal structure of argp from mycobacterium tuberculosis Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	N	L	P	L	L	N	D	L	R	V	F	M	L	V	A	R	R	A	G	F	A	A	V	A	E	E	L	G	V	S	P	A	F	V	S	K	R	I	A	L	L	E	Q	T	L	N	V	V	L	L	H	R	T	T	R	R	V	T	I	T	E	E	G	E	R	I	Y	E	W	A	Q	R	I	L	Q	D	V	G
Query Conservation
Alig confidence				.	.	.	.																																																	.
Template Conservation				.	.	.	.																																																	.
Template Sequence		L	D	.	.	.	.	G	P	Q	L	A	A	L	A	A	V	V	E	L	G	S	F	D	A	A	A	E	R	L	H	V	T	P	S	A	V	S	Q	R	I	K	S	L	E	Q	Q	V	G	Q	V	L	V	V	R	.	E	K	P	C	R	A	T	T	A	G	I	P	L	L	R	L	A	A	Q	T	A	L	L	E	S
Template Known Secondary structure				.	.	.	.	S													T							T	T	T	T																		T	S						.	S	S	S					G	G	G
Template Predicted Secondary structure				.	.	.	.																																																	.
Template SS confidence
		6	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	M	D	E	L	S	D	V	R	Q	V	P	Q	G	M	L	R	I	I	S	S	F	G	F	G	R	Q	V	V	A	P	A	L	L	A	L	A	K	A	Y	P	Q	L	E	L	R	F	D	V	E	D	R	L	V	D	L	V	N	E	G	V	D	L	D	I	R	I	G	D	D	I	A	P	N	L	I	A	R	K
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		E	A	L	A	E	M	G	A	S	L	K	R	T	R	I	T	I	A	V	N	.	.	A	D	S	M	A	T	W	F	S	A	V	F	D	G	L	G	D	V	L	L	D	V	R	I	E	D	Q	D	H	S	A	R	L	L	R	E	G	V	A	M	G	A	V	T	T	E	R	N	P	V	P	G	C	R	V	H	P	L
Template Known Secondary structure				T	T	T	T			T	T											.	.						T	T	G	G	G	G	G	T	T			S																			T	T	S		S					S			S			T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	N	Y	R	I	L	C	A	S	P	E	F	I	A	Q	H	G	A	P	K	H	L	T	D	L	S	A	L	P	C	L	V	I	K	E	R	D	H	P	F	G	V	W	Q	L	R	N	K	E	G	P	H	A	I	K	V	T	G	P	L	S	S	N	H	G	E	I	V	H	Q	W	C	L	D	G	Q	G	I
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		G	E	M	R	Y	L	P	V	A	S	R	P	F	V	Q	R	H	L	S	D	G	F	T	A	A	A	A	A	K	A	P	S	L	A	W	N	R	D	D	.	.	.	G	L	Q	D	M	L	V	R	K	A	F	R	R	A	I	T	R	P	T	H	F	V	P	T	T	E	G	F	T	A	A	A	R	A	G	L	G	W
Template Known Secondary structure																				T	T		S		T	T	T	T	T	T	S		B			S	S	T	T		.	.	.												S	S						B					S										T	T	S		B
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	S	W	W	D	V	S	E	N	I	A	S	G	H	L	V	Q	V	L	P	E	Y	Y	Q	P	A	N	V	W	A	V	Y	V	S	R	L	A	T	S	A	K	V	R	I	T	V	E	F	L	R	Q	Y	F	A	E
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		G	M	F	P	E	K	L	A	A	S	P	L	A	D	G	S	F	V	R	V	C	D	.	.	.	I	H	L	D	V	P	L	Y	W	Q	C	W	K	L	D	S	P	I	I	A	R	I	T	D	T	V	R	A	A	A	S	G
Template Known Secondary structure																S	S				S	S	S	.	.	.													S	S																T	T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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