Job Description P76250 Confidence 99.74% Date Wed Jan 25 15:21:06 GMT 2012 Rank 19 Aligned Residues 200 % Identity 29% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	G	M	L	R	I	I	S	S	F	G	F	G	R	Q	V	V	A	P	A	L	L	A	L	A	K	A	Y	P	Q	L	E	L	R	F	D	V	E	D	R	L	V	D	L	V	N	E	G	V	D	L	D	I	R	I	G	D	D	I	A	P	N	L	I	A	R	K	L	A	T	N	Y	R	I	L	C	A	S	P
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	I	A	L	R	A	G	D	.	.	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V	I	A	S	P
Template Known Secondary structure																		T													T	T									S	T	T					T	T	S	S	S								.	.		S	S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	I	A	Q	H	G	A	P	K	H	L	T	D	L	S	A	L	P	C	L	V	I	K	E	R	D	H	P	F	G	V	W	Q	L	R	N	K	E	G	P	H	A	I	K	V	T	G	P	L	S	S	N	H	G	E	I	V	H	Q	W	C	L	D	G	Q	G	I	A	L	R	S	W	W	D	V	S	E	N	I
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	.	.	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D	F	L	V	D	N	D	I
Template Known Secondary structure											S	S	G	G	G	G	G	G	S		B				.	.	S	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure																									.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	S	G	H	L	V	Q	V	L	P	E	.	.	Y	Y	Q	P	A	N	V	W	A	V	Y	V	S	R	L	A	T	S	A	K	V	R	I	T	V	E	F	L	R	Q	Y	F	A
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L	G
Template Known Secondary structure				T	S	S					T	T	T	B													G	G	G	G	G																.
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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