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Job DescriptionP76250
Confidence99.74%DateWed Jan 25 15:21:06 GMT 2012
Rank19Aligned Residues200
% Identity29%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  PQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASP
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Template Sequence  PQGVLSVDSAXPXVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGD. . DSGLRARHLFDSRFRVIASP
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STTTTSSS


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   91........100.........110.........120.........130.........140........ .150.........160........
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  EFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENI
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Template Sequence  EYLAKHGTPQSTEELAGHQCLGF. . TEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDI
Template Known Secondary structure 


SSGGGGGGS
B
..SS
GGGG
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SSSSTTS
B
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   171........180.........190... ......200.........210.........220.........230.........240........
 
   253......260... ......270.........280.........290......
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Query Sequence  ASGHLVQVLPE. . YYQPANVWAVYVSRLATSAKVRITVEFLRQYFA
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Template Sequence  AEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG
Template Known Secondary structure  TSS
TTTB



GGGGG

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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