Job Description P76250 Confidence 87.29% Date Wed Jan 25 15:21:06 GMT 2012 Rank 199 Aligned Residues 193 % Identity 9% Template c1twyG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae Resolution 1.65 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		L	R	I	I	S	S	F	G	F	G	R	Q	V	V	A	P	A	L	L	A	L	A	K	A	Y	P	Q	L	E	L	R	F	D	V	E	D	R	L	V	D	L	V	N	E	G	V	D	L	D	I	R	I	G	D	.	.	.	.	.	.	.	D	I	A	P	N	L	I	A	R	K	L	A	T	N	Y	R	I	L	C
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence												.																																												.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		I	T	I	S	G	S	T	S	V	A	.	R	I	X	D	V	L	A	E	K	Y	N	Q	Q	H	P	E	T	Y	V	A	V	Q	G	V	G	S	T	A	G	I	S	L	L	K	K	G	V	A	D	I	A	X	T	S	R	Y	L	T	E	S	E	A	Q	N	T	L	H	T	F	T	L	A	F	D	G	L	A	I	V
Template Known Secondary structure												.															T	T								S											T	T	S		S					S	S				T	T	T			T	T
Template Predicted Secondary structure												.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	S	P	E	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	H	G	A	P	K	H	L	T	D	L	S	A	L	P	C	L	V	I	K	E	R	D	H	P	F	G	V	W	Q	L	R	N	K	E	G	P	H	A	I	K	V	T	G	P	L	S	S	.	.	.	.	.	.	.	.	.	N	H	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	Q	A	N	P	V	T	N	L	T	R	E	Q	L	Y	G	I	Y	K	G	Q	I	T	N	W	K	Q	V	G	G	N	D	Q	K	I	A	V	V	T	R	E	A	S	S	G	T	R	Y	S	F	E	S	L	X	G	L	T	K	T	V	K	D	R	E	V	S	D	V	A	P	T	A	L	V	V	N	S	N	S
Template Known Secondary structure				T	T																	T	S			B	G	G	G	G	T	S		S		B								T	T												T						S	S	S					S		T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.									.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		E	I	V	H	Q	W	C	L	D	G	Q	G	I	A	L	R	S	W	W	D	V	S	E	N	I	A	S	G	H	L	V	Q	V	L	P	E	Y	Y	.	.	.	.	.	.	.	.	Q	P	A	N	V	W	A	V	Y	V	S	R	L	A	T	S	A	K	V	R	I	T	V	E	F	L
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.										.
Template Conservation																																																									.
Template Sequence		X	X	K	T	L	V	N	H	N	T	Q	A	V	G	F	I	S	I	G	S	V	D	K	S	V	K	A	I	Q	F	E	K	A	D	P	T	S	D	N	I	A	K	H	T	Y	Q	L	S	R	P	F	L	I	L	H	.	Y	S	D	N	A	D	E	Q	T	K	E	F	I	A	F	L
Template Known Secondary structure											T	T							G	G	G			T	T	S						T	T	B									T	T			S										.		T	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions