Job Description P76250 Confidence 21.18% Date Wed Jan 25 15:21:06 GMT 2012 Rank 399 Aligned Residues 41 % Identity 17% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		M	N	N	L	P	L	L	N	D	L	R	V	F	M	L	V	A	.	.	.	.	.	R	R	A	G	F	A	A	V	A	E	E	L	G	V	S	P	A	F	V	S	K	R	I	A	L
Query Conservation																			.	.	.	.	.
Alig confidence								.											.	.	.	.	.
Template Conservation								.
Template Sequence		L	S	K	L	S	E	.	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K
Template Known Secondary structure		T	T	S	S		T	.	T	T	T					T	T	S	S	T	T	S	S										T	T	S		S
Template Predicted Secondary structure								.
Template SS confidence
		373	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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