 |
Job Description | P0CF66 | Confidence | 92.16% | Date | Thu Jan 5 11:31:24 GMT 2012 |
Rank | 61 | Aligned Residues | 46 |
% Identity | 20% | Template | d1f43a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | S | T | S | K | K | P | R | K | Q | H | S | P | E | F | R | S | E | A | L | K | L | A | E | R | I | G | . |
. |
. |
. |
. |
. |
V | T | A | A | A | R | E | L | S | L | Y | E | S | Q | L | Y | N | W |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|   |
|
|   |
|
|
|   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |
|
Template Sequence |   |
K | K | E | K | S | P | K | G | K | S | S | I | S | P | Q | A | R | A | F | L | E | Q | V | F | R | R | K | Q | S | L | N | S | K | E | K | E | E | V | A | K | K | C | G | I | T | P | L | Q | V | R | V | W |
Template Known Secondary structure |   |
|
|
| S |
|
|
|
| S | S |
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|