Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF40
Confidence21.05%DateThu Jan 5 11:25:04 GMT 2012
Rank6Aligned Residues85
% Identity15%Templated1y5ic1
SCOP infoHeme-binding four-helical bundle Respiratory nitrate reductase 1 gamma chain Respiratory nitrate reductase 1 gamma chain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60...... ...70.........80.........90...
Predicted Secondary structure 







.....................





Query SS confidence 































. . . . . . . . . . . . . . . . . . . . .


























Query Sequence  FSVFPIISLVLTVYCLHQRYLNRTMPVGLPGL. . . . . . . . . . . . . . . . . . . . . AAACFILGVLLYSTVVRAEYPDIGSNF
Query Conservation 













 


 

  
     
  .....................
  




 




 

 








Alig confidence 































.....................


























Template Conservation    
 




 

  
   
           

     
 
   
 


 
 
 
  

  
 
              
  
Template Sequence  FDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFVGHFFGMLTLPIEVAQKMAMFAGGA
Template Known Secondary structure  T
GGG
S



TTT

TT


Template Predicted Secondary structure 








Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   94.....100.........110.........
Predicted Secondary structure 
Query SS confidence 

























Query Sequence  FPAVLSVIMVFWIGAKMRNRKQEVAE
Query Conservation 

    


  

  
   

   
 
Alig confidence 

























Template Conservation 

   


   

 

      
  
Template Sequence  SGVLCLIGGVLLLKRRLFSPRVRATT
Template Known Secondary structure  S
Template Predicted Secondary structure 






Template SS confidence 

























   97..100.........110.........120..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions