Job Description P0AF40 Confidence 6.41% Date Thu Jan 5 11:25:04 GMT 2012 Rank 24 Aligned Residues 77 % Identity 9% Template c3nd0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sll0855 protein; PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter Resolution 3.20 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																						.	.	.
Query SS confidence																							.	.	.	.	.	.																						.	.	.
Query Sequence		V	F	P	I	I	S	L	V	L	T	V	Y	C	L	H	Q	R	Y	L	N	R	.	.	.	.	.	.	T	M	P	V	G	L	P	G	L	A	A	A	C	F	I	L	G	V	L	L	Y	.	.	.	S	T	V	V	R	A	E	Y	P	D	I	G	S	N	F	F	P	A	V	L	S	V	I	M	V	F	W	I	G
Query Conservation																							.	.	.	.	.	.																						.	.	.
Alig confidence																							.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		F	A	P	M	L	G	I	A	S	I	V	S	V	A	M	A	R	H	F	H	L	L	F	P	S	Q	I	P	E	P	A	V	M	A	I	A	G	M	G	A	L	V	A	A	T	V	R	A	P	L	T	A	I	L	L	T	I	E	M	T	D	N	Y	F	V	I	L	P	L	L	V	T	C	L	V	A	S	V	V	A
Template Known Secondary structure																									T	T	T		S	S	T							T	T	S								S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		108	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	M	R	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	G	G	K
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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