Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC41
Confidence99.40%DateThu Jan 5 11:17:07 GMT 2012
Rank142Aligned Residues230
% Identity22%Templated1feca1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD/NAD-linked reductases, N-terminal and central domains
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20......... 30.........40.........50.........60.........70.........80....
Predicted Secondary structure 



.






























Query SS confidence 























.






















































Query Sequence  REFDAVVIGAGGAGMRAALQISQS. GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA
Query Conservation     





 
 


 

  

  .
  
 



    

 
  
 

          
  
    
            
Alig confidence 























.



























........................


Template Conservation    






 




 

  

   
  
 


                    ........................   
Template Sequence  RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNV. . . . . . . . . . . . . . . . . . . . . . . . GCV
Template Known Secondary structure 
S

S


S
SSSBTTTBS
TT
........................S
Template Predicted Secondary structure 


























........................


Template SS confidence 















































































   2.......10.........20.........30.........40.........50.... ...
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW
Query Conservation 
          
  
   

 
     
                    
        
      
       

 
    
Alig confidence 








































................






















Template Conservation                                           ................                    
  
Template Sequence  PKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAK. . . . . . . . . . . . . . . . NKAVSGINDSYEGMFADTEGLTF
Template Known Secondary structure  GGGGT



GGG



................TSTT
Template Predicted Secondary structure 











................
















Template SS confidence 















































































   58.60.........70.........80.........90........ .100.........110.........120.
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  YALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPT
Query Conservation      

    
 
 

       
    
 
  






              



  

  


 
  

     
 
Alig confidence 
























































.......................
Template Conservation                              
    
 
  
                  .......................
Template Sequence  HQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEVPRSQTLQL. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  STTSSSSTTS



B








BS
TTS
G.......................
Template Predicted Secondary structure 

































.......................
Template SS confidence 















































































   122.......130.........140.........150.........160.........170........
 
   245....250.........260.........270.........280.........290.........300.........310.........320....
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  GIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLE
Query Conservation         
        
  


  
 

          
  

     
  
   
             
      
 
 
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   325....330.........340.........350.........360.........370.........380.........390.........400....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  SRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNS
Query Conservation                  
       
 
    
 


 

    
         
 








 

    
  

 
 
Alig confidence  ...........









............









..........

















.........
Template Conservation  ...........   

     ............
 
 

    ..........

 
 


 

       .........
Template Sequence  . . . . . . . . . . . EKAGVEVAKN. . . . . . . . . . . . GAIKVDAYSK. . . . . . . . . . TNVDNIYAIGDVTDRVML. . . . . . . . .
Template Known Secondary structure  ...........GGGT

B
TT............S
B


TT
B..........
SSTT
GGGG
S


.........
Template Predicted Secondary structure  ...........






............







..........










.........
Template SS confidence 















































































   296...300..... ....310..... ....320.........330...
 
   405....410.........420
Predicted Secondary structure 
Query SS confidence 















Query Sequence  LLDLVVFGRAAGLHLQ
Query Conservation 
    
 
  

  

Alig confidence 















Template Conservation     
  

  

  
 
Template Sequence  TPVAINEGAAFVDTVF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















   334.....340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions