Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC41
Confidence99.68%DateThu Jan 5 11:17:07 GMT 2012
Rank68Aligned Residues321
% Identity15%Templatec3i3lA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alkylhalidase cmls; PDBTitle: crystal structure of cmls, a flavin-dependent halogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  PVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQD
Query Conservation       





 
 


 

  

  
  
 



    

 
  
 

          
  
    
            
Alig confidence 









































...





.............................
Template Conservation   
   











 

  


 

 
 



   

  ...




 .............................
Template Sequence  HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYR. . . VGESLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 






STT

SS
SS


...


B

.............................
Template Predicted Secondary structure 


















...





.............................
Template SS confidence 















































































   0.........10.........20.........30.........40. ......
 
   84.....90.........100.... .....110.........120.........130.........140.........150.....
Predicted Secondary structure 


........
































Query SS confidence 




















. . . . . . . .


















































Query Sequence  AIEYMCKTGPEAILELEHMGL. . . . . . . . PFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK
Query Conservation 

          
  
   

........ 
     
                    
        
      
      
Alig confidence  .........











........


















































Template Conservation  .........
     
  


 
 
       
 
  
                          


  

  
   
  
Template Sequence  . . . . . . . . . PGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPAPWVFDHAVQVKREEFDKLLLDEARS
Template Known Secondary structure  .........TT




SSS







TT

S


Template Predicted Secondary structure  .........


























Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100.........110........
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  NHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQD
Query Conservation   

 
        

    
 
 

       
    
 
  






              



  

  


 
  
Alig confidence 


























...




















.................











Template Conservation   

 
  
  
  
             ...  
   

 








  
................. 

  

     
Template Sequence  RGITVHEETPVTDVDLSDPDRVVLTVR. . . RGGESVTVESDFVIDAGGSGG. . . . . . . . . . . . . . . . . PISRKLGVRQYD
Template Known Secondary structure  TT
TT



STT
...TTS

GGG
.................T
Template Predicted Secondary structure 




...









.................





Template SS confidence 















































































   121........130.........140....... ..150.........160........ .170.........180
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  MEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKL
Query Conservation 

     
        
        
  


  
 

          
  

     
  
   
             
 
Alig confidence 












































....................














Template Conservation        

                 
   
   

 
 


    ....................  

 
         
Template Sequence  EFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDL. . . . . . . . . . . . . . . . . . . . YSVGLVVDRSKSAEV
Template Known Secondary structure 


S

STTTT
TT
SSS....................GGG
Template Predicted Secondary structure 























....................







Template SS confidence 















































































   181........190.........200.........210.........220..... ....230.........240
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  DHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVH
Query Conservation       
 
                 
       
 
    
 


 

    
         
 








 

    
Alig confidence 















































..................










...
Template Conservation       
      
   
     
                         ..................








  ...
Template Sequence  REQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSAD. . . . . . . . . . . . . . . . . . RFFLCGDAACF. . .
Template Known Secondary structure 
TT
TT

S

S
ST..................T
GGGT
B...
Template Predicted Secondary structure 






















..................




...
Template SS confidence 















































































   241........250.........260.........270.........280........ .290.........
 
   396...400.........410.........420.......
Predicted Secondary structure 







Query SS confidence 































Query Sequence  GANRLGGNSLLDLVVFGRAAGLHLQESIAEQG
Query Conservation 
  

 
 

    
 
  

  

       
Alig confidence  .






























Template Conservation  .



 



 


 

  

 

      

Template Sequence  . TDPLFSQGVHLASQSAVSAAAAIDRITRHGD
Template Known Secondary structure  .

GGG


GG
Template Predicted Secondary structure  .







Template SS confidence 































   300.........310.........320.........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions