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Job DescriptionP0AC41
Confidence99.60%DateThu Jan 5 11:17:07 GMT 2012
Rank91Aligned Residues240
% Identity28%Templatec3fbsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of the oxidoreductase from agrobacterium2 tumefaciens
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA
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Template Sequence  MK. FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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STT





TTTT
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   1. .......10.........20.........30.........40......
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW
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Template Conservation  .................................................                               
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FLGQDGKAPGEIIAEARRQIERYPTIHWVEG
Template Known Secondary structure  .................................................STT
TT

TT
TTS
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   47..50.........60.........70.......
 
   165....170.........180.........190.........200.........210..
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Query Sequence  YALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQST. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RVTDAKGSFGEFIV. . . . . . . EIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAAS
Template Known Secondary structure 
TT.......TTT







BTSGGGBTTTS
TGGGT

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   78.80.........90. ........100.........110.........120.........130.........140.........150
 
   213......220.........230.........240.........250.........260.........270..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . TNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERF
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Template Conservation           
                           

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Template Sequence  PMAIHHALMLPDWGETTFFTNGIVEPDADQHALLAARGVRVETTRIREIA. . . . . . . . . . . . . . . . . GHADVVLADGRSI
Template Known Secondary structure  TTGGGT
TTT



T

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   151........160.........170.........180.........190.........200 .........210...
 
   273......280.........290.........300.........310.........320.........330.........340.........350..
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Query Sequence  MERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPT
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Template Conservation                        ......................................................    
Template Sequence  ALAGLFTQPKLRITVDWIEKLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CAVE
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   214.....220.........230..... ....
 
   353......360.........370.........380.........390.........400.........410.........420....
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Query Sequence  CHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIA
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Template Sequence  EGPMGSTIVTDPMKQ. . . . . . . . . . TTARGIFACGDVAR. PAGS. . . . . . . . VALAVGDGAMAGAAAHRSIL
Template Known Secondary structure  TT


TTSB..........
SSTT
SGGG
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   240.........250.... .....260........ .270.. .......280.........290..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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