Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC41
Confidence99.52%DateThu Jan 5 11:17:07 GMT 2012
Rank119Aligned Residues181
% Identity18%Templatec2olnA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nikd protein; PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI
Query Conservation     





 
 


 

  

  
  
 



    

 
  
 

          
  
    
            

Alig confidence 

































































..........



Template Conservation     








 


 
  

  
  
 


        


                  
   
..........    
Template Sequence  ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLET. . . . . . . . . . LPLW
Template Known Secondary structure 


STT

SS
TT
SSSS

SS
S

SS..........
Template Predicted Secondary structure 


























..........
Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60........ .70..
 
   86...90. ........100.........110.........120.........130.........140
Predicted Secondary structure  .........................


































Query SS confidence 





. . . . . . . . . . . . . . . . . . . . . . . . .
















































Query Sequence  EYMCKT. . . . . . . . . . . . . . . . . . . . . . . . . GPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADR
Query Conservation        .........................    
  
   

 
     
                    
       
Alig confidence 





.........................









































..




Template Conservation    
            
                                                         ..     
Template Sequence  RALESRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQP. . DGGTI
Template Known Secondary structure  T






SS

BTTB
TT





S

TT
T..T
Template Predicted Secondary structure 
























..




Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140..... ....150
 
   141........150.........160.........170.........180.........190.........200......
Predicted Secondary structure 






















Query SS confidence 

































































Query Sequence  TGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG
Query Conservation   
      
       

 
        

    
 
 

       
    
 
  






  
Alig confidence 

































....








....














Template Conservation                  
        
        ....         ....      

   
   
Template Sequence  DVRGTLAALFTLAQAAGATLRAGETVTELVPDAD. . . . GVSVTTDRG. . . . TYRAGKVVLACGPYT
Template Known Secondary structure  TT
S

TT....SS
....

GGG
Template Predicted Secondary structure 









....
....













Template SS confidence 

































































   151........160.........170.........180.... .....190... ......200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions