Job Description P0AC41 Confidence 99.56% Date Thu Jan 5 11:17:07 GMT 2012 Rank 103 Aligned Residues 196 % Identity 21% Template c2jbvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:choline oxidase; PDBTitle: crystal structure of choline oxidase reveals insights into2 the catalytic mechanism Resolution 1.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	V	R	E	F	D	A	V	V	I	G	A	G	G	A	G	M	R	A	A	L	Q	I	S	Q	.	S	G	Q	T	C	A	L	L	S	K	V	F	P	T	R	S	H	T	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	S	D	R	E	F	D	Y	I	V	V	G	G	G	S	A	G	A	A	V	A	A	R	L	S	E	D	P	A	V	S	V	A	L	V	E	A	G	P	D	D	R	G	V	P	E	V	L	Q	L	D	R	W	M	E	L	L	E	S	G	Y	D	W	D	Y	P	I	E	P	Q	E	N	G	N	S	F	M	R	H
Template Known Secondary structure		G														S											T	T	S	T	T	S							S	S				T	T						B	G	G	G	G	G	G	G	T	T	S	T	T	B					B				S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
							49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	Q	G	G	I	T	V	A	L	G	N	T	H	E	D	N	W	E	W	H	M	Y	D	T	V	K	G	S	D	Y	I	G	D	Q	D	A	I	E	Y	M	C	K	T	G	P	E	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	K	V	M	G	G	C	S	S	H	N	S	C	I	A	F	W	A	P	R	E	D	L	D	E	W	E	A	K	Y	G	A	T	G	W	N	A	E	A	A	W	P	L	Y	K	R	L	E	T	N	E	D	A	G	P	D	A	P	H	H	G	D	S	G	P	V	H	L	M	N	V	P	P	K	D	P	T	G
Template Known Secondary structure				B		S	T	T	G	G	G	G	T	S			B															T	T			T	T		S															T	T		B	T	T	B	T	T	S		B	S		S								S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
						97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	E	L	E	H	M	G	L	P	F	S	R	L	D	D	G	R	I	Y	Q	R	P	F	G	G	Q	S	K	N	F	G	G	E	Q	A	A	R	T	A	A	A	A	D	R	T	G	H	A	L	L	H	T	L	Y	Q	Q	N	L	K	N	H	T	T	I	F	S	E	W	Y	A	L	D	L	V	K	N
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.
Template Sequence		V	A	L	L	D	A	C	E	Q	A	G	I	P	R	A	K	F	N	.	.	.	.	.	.	.	.	.	T	G	T	T	V	V	N	G	A	N	F	F	Q	I	N	R	R	A	D	G	T	R	S	S	S	S	V	S	Y	I	H	P	I	V	E	Q	E	N	F	T	L	L	T	G	L	R	A	R	Q	L	V	F	D
Template Known Secondary structure											T	T			B			S	S	.	.	.	.	.	.	.	.	.	S	S	S			S	S									B		T	T	S	B	B								T	G	G	G	T	T		T	T						S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.										.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Q	D	G	A	V	V	G	C	T	A	L	C	I	E	T	G	E	V	V	Y	F	K	A	R	A	.	T	V	L	A	T	G	G	A	G
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		A	D	R	R	C	T	G	V	D	I	V	D	S	A	F	G	H	T	H	R	L	T	A	R	N	E	V	V	L	S	T	G	A	I	D
Template Known Secondary structure		T	T	S	B								S	S	T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions