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Job DescriptionP0AC41
Confidence99.77%DateThu Jan 5 11:17:07 GMT 2012
Rank46Aligned Residues349
% Identity16%Templatec2gmhA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKLPVREFDAVVIGAGGAGMRAALQISQ. . . . . . SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVK
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Template Sequence  MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFP. . . . . . . . . . . .
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   2930.........40.........50.........60.........70.........80.........90......
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  GSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . DWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAE
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   97..100.........110.........120.........130.........140.........150.....
 
   155....160.........170.........180... ......190.........200.........210.........220....
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Query Sequence  KNHTTIFSEWYALDLVKNQDGAVVGCTAL. . . . . . . . . . CIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVG
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Template Sequence  ALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG. . . . . . . . . . . . . HLAKQ
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   156...160.........170.........180.........190.........200.........210....... ..220..
 
   225....230.. .......240.........250.........260.........270.........280.........
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Query Sequence  MAIRAGVP. . . . . . . . . . . . . . . VQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVV
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Template Sequence  LYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS
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   223......230.........240.........250.........260.........270.........280.........290.........300..
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  ARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQAL
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Template Sequence  PFREFQRWKH. . . . . . . . . . . . . . . . . . . . . . . . . . . HPSIKPTLEGGKRIAYGARALNEGGFQSIPK. . . . . . . . . . . .
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   303......310.. .......320.........330.........340...
 
   370.........380.........390.........400.........410.........420.........430.........440......
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Query Sequence  TVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNR
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Template Sequence  . . . . . . . . LTFPGGLLIGCSPGF. . . . MNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKN
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   344.....350........ .360.........370.........380.........390.........400........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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