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Job DescriptionP0AC41
Confidence99.53%DateThu Jan 5 11:17:07 GMT 2012
Rank117Aligned Residues188
% Identity19%Templatec2f5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pyranose 2-oxidase; PDBTitle: reaction geometry and thermostability mutant of pyranose 2-oxidase2 from the white-rot fungus peniophora sp.
Resolution1.41 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  REFDAVVIGAGGAGMRAALQISQSGQTCALLSKV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVVD
Template Known Secondary structure  S

STT

SS


SSSSTT

TT
S
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S









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   45....50.........60.........70.........80.........90.........100.........110.........120....
 
   40.........50.........60.. .......70....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPTRSHTVSAQGGITVALGNTHE. . . . . . . . . . . DNWEWHMYDTVK
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Template Sequence  TLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAES
Template Known Secondary structure 
S
TTS


SS



TT

TT

TTS

TT


STTGGGGT


B




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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  GSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNL
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Template Sequence  YFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDA. . . . . . . . . . . . . P
Template Known Secondary structure  TS
TTTT
TTTSS



TT






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   205....210.........220.........230.........240.........250.........260.........270 .
 
   155....160.........170.. .......180.........190.........200......
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Query Sequence  KNHTTIFSEWYALDLVKN. QDGAVVGCTALCIETGEVVYFKARATVLATGGAG
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Template Sequence  EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVH
Template Known Secondary structure 
S
TTSS
TTT


S
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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