Job Description P0AC41 Confidence 99.58% Date Thu Jan 5 11:17:07 GMT 2012 Rank 96 Aligned Residues 190 % Identity 21% Template c1naaB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cellobiose dehydrogenase; PDBTitle: cellobiose dehydrogenase flavoprotein fragment in complex with2 cellobionolactam Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	D	A	V	V	I	G	A	G	G	A	G	M	R	A	A	L	Q	I	S	Q	S	G	Q	T	C	A	L	L	S	K	V	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Y	D	Y	I	I	V	G	A	G	P	G	G	I	I	A	A	D	R	L	S	E	A	G	K	K	V	L	L	L	E	R	G	G	P	S	T	K	Q	T	G	G	T	Y	V	A	P	W	A	T	S	S	G	L	T	K	F	D	I	P	G	L	F	E	S	L	F	T	D	S	N	P	F	W	W	C	K	D	I	T
Template Known Secondary structure											S													T	T								S	S				S	G	G	G	T						G	G	G	T	T	T	T			T	T	T		G	G	G	G	G	G	G	G	S		S	S		T	T	B		T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
								42	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	T	R	S	H	T	V	S	A	Q	G	G	I	.	.	.	.	.	.	.	.	.	T	V	A	L	G	N	T	H	E	D	N	W	E	W	H	M	Y	D	T	V	K	G	.	.	S	D	Y	I	G	D	Q	D	A	I	E	Y	M	C	K	T	G	P	E	A	I	L	E	L	E	H	M	G	L
Query Conservation		.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		V	F	A	G	C	L	V	G	G	G	T	S	V	N	G	A	L	Y	W	Y	P	N	D	G	D	F	S	S	S	V	G	W	P	S	S	W	T	N	H	A	P	Y	T	S	K	L	S	S	R	L	P	S	T	D	H	P	S	T	D	G	Q	R	Y	L	E	Q	S	F	N	V	V	S	Q	L	L	K	G	Q	G	Y
Template Known Secondary structure		S			B		S	T	T	G	G	G	G	T	S			B						G	G	G	G		G	G	G	T			G	G	G	S													S			B	S			S	T	T	S				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	S	R	L	D	D	G	R	I	Y	Q	R	P	F	G	G	Q	S	K	N	F	G	G	E	Q	A	A	R	T	A	A	A	A	D	R	T	G	H	A	L	L	H	T	L	Y	Q	Q	N	L	K	N	H	T	T	I	F	S	E	W	Y	A	L	D	L	V	K	N	Q	D	G	A	V	V	G	C	T	A	L	C
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.																															.
Template Conservation																															.	.	.	.	.	.	.	.	.																															.
Template Sequence		N	Q	A	T	I	N	D	N	P	N	Y	K	D	H	V	F	G	Y	S	A	F	D	F	L	N	G	K	R	A	.	.	.	.	.	.	.	.	.	G	P	V	A	T	Y	L	Q	T	A	L	A	R	P	N	F	T	F	K	T	N	V	M	V	S	N	V	V	R	N	.	G	S	Q	I	L	G	V	Q	T	N	D
Template Known Secondary structure						G	G	G		T	T			T	T							B				T	T				.	.	.	.	.	.	.	.	.					T							T		T	T						S										.	T	T								S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.										.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.
		185				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		I	.	.	.	E	T	G	E	V	V	Y	F	K	A	R	A	T	V	L	A	T	G	G	A	G
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		P	T	L	G	P	N	G	F	I	P	V	T	P	K	G	R	V	I	L	S	A	G	A	F	G
Template Known Secondary structure		T	T	S	S	G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions