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Job DescriptionP0AC41
Confidence99.47%DateThu Jan 5 11:17:07 GMT 2012
Rank129Aligned Residues182
% Identity14%Templatec1ju2A_
PDB info PDB header:lyaseChain: A: PDB Molecule:hydroxynitrile lyase; PDBTitle: crystal structure of the hydroxynitrile lyase from almond
Resolution1.47 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40. .
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Query Sequence  REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T
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Template Sequence  GSYDYVIVGGGTSGCPLAATLSE. KYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVL
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STTTT.TS

SSB
GGGSGGGGBGGGS


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TTS

BT
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   25....30.........40....... ..50.........60.........70.........80.........90.........100...
 
   43......50.........60.. .......70.........80.........90.........100.........110....
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Query Sequence  RSHTVSAQGGITVALGNTHE. . . . . . . . DNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRI
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Template Sequence  GGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTA. . . . . . FLEAGVHPNHGFSLDH
Template Known Secondary structure  TGGGGTS


B

TTSSTTSSS



B




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B
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   104.....110.........120.........130.........140.........150.........160. ........170.......
 
   115....120.........130.........140.........150.........160.........170..... ....180........ .190
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Query Sequence  YQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDG. . AVVGCTALCIETG. . EV
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Template Sequence  EEGTRITGSTFDNKGTRHAADE. . . . . . . . . . . . LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQA
Template Known Secondary structure 
S
SB
TTSBB

GGG............GGGGS
TTTS


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   178.180.........190......... 200.........210.........220.........230.........240.....
 
   191........200......
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Query Sequence  VYFKARATVLATGGAG
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Template Sequence  FVRSKGEVIVSAGTIG
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   246...250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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