Job Description P0AC41 Confidence 100.00% Date Thu Jan 5 11:17:07 GMT 2012 Rank 11 Aligned Residues 404 % Identity 28% Template c1jrxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		K	L	P	V	R	E	F	D	A	V	V	I	G	A	G	G	A	G	M	R	A	A	L	Q	I	S	Q	S	G	Q	T	C	A	L	L	S	K	V	F	P	T	R	S	H	T	V	S	A	Q	G	G	I	T	V	A	L	G	N	T	H	.	.	.	.	.	E	D	N	W	E	W	H	M	Y	D	T	V	K	G	S
Query Conservation																																																														.	.	.	.	.
Alig confidence																																																														.	.	.	.	.
Template Conservation
Template Sequence		S	A	P	H	D	T	V	D	V	V	V	V	G	S	G	G	A	G	F	S	A	A	I	S	A	T	D	S	G	A	K	V	I	L	I	E	K	E	P	V	I	G	G	N	A	K	L	A	A	G	G	M	N	A	A	W	T	D	Q	Q	K	A	K	K	I	T	D	S	P	E	L	M	F	E	D	T	M	K	G	G
Template Known Secondary structure		S			S				S							S													T	T								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	I	G	D	Q	D	A	I	E	Y	M	C	K	T	G	P	E	A	I	L	E	L	E	H	M	G	L	P	F	S	R	L	D	D	G	R	I	Y	Q	R	P	F	G	G	Q	S	K	N	F	G	G	E	Q	A	A	R	T	A	A	A	A	D	R	T	G	H	A	L	L	H	T	L	Y	Q	Q	N	L	K	N
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	I	N	D	P	A	L	V	K	V	L	S	S	H	S	K	D	S	V	D	W	M	T	A	M	G	A	D	L	T	D	V	G	.	.	.	.	.	.	.	.	.	.	.	.	M	M	G	G	A	S	V	N	R	A	H	R	P	T	G	G	A	G	V	G	A	H	V	V	Q	V	L	Y	D	N	A	V	K	R
Template Known Secondary structure		T	T		S																						T	T								.	.	.	.	.	.	.	.	.	.	.	.			T	T		S	S						S	T	T	T																		T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.													.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.													.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	T	I	F	S	E	W	Y	A	L	D	L	V	K	N	Q	D	G	A	V	V	G	C	T	A	L	C	I	E	T	G	E	V	V	Y	F	K	A	R	A	T	V	L	A	T	G	G	A	G	R	I	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	S	T	T	N	A	H	I	N	T	G	D	G	V	G
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		N	I	D	L	R	M	N	T	R	G	I	E	V	L	K	D	D	K	G	T	V	K	G	I	L	V	K	G	.	M	Y	K	G	Y	Y	W	V	K	A	D	A	V	I	L	A	T	G	G	F	A	K	N	N	E	R	V	A	K	L	D	P	S	L	K	G	F	I	S	T	N	Q	P	G	A	V	G	D	G	L	D
Template Known Secondary structure		T					S	S										T	T	S	S									.	T	T	T								S										T	T										G	G	G	T	T			B	S	S		T	T		S	S
Template Predicted Secondary structure																														.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	I	R	A	G	V	P	V	Q	D	M	E	M	W	Q	F	H	P	T	G	I	A	G	A	G	V	L	V	T	E	G	C	R	G	E	G	G	Y	L	L	N	K	H	G	E	R	F	M	E	R	Y	A	P	N	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	G	R	D	V	V
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	E	N	A	G	G	A	L	K	D	M	Q	Y	I	Q	A	H	P	T	L	S	V	K	G	G	V	M	V	T	E	A	V	R	G	N	G	A	I	L	V	N	R	E	G	K	R	F	V	N	E	I	T	T	A	D	K	A	S	A	A	I	L	A	Q	T	G	K	S	A	Y	L	I	F	D	D	S	V	R	K
Template Known Secondary structure						T	T						T	T										T	T	T		S	B			T					T	T						T	T	S				S		T	T	S											T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.													.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	S	I	M	I	E	I	R	E	G	R	G	C	D	G	P	W	G	P	H	A	K	L	K	L	D	H	L	G	K	E	V	L	E	S	R	L	P	G	I	L	E	L	S	R	T	F	A	H	V	D	P	V	K	E	P	.	.	.	.	.	.	.	.	.	.	.	.	I	P	V	I	P	T	C	H	Y	M	M
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	S	K	I	D	K	Y	I	G	L	G	V	A	P	T	A	D	S	L	V	K	L	G	K	M	E	G	I	D	G	K	A	L	T	E	T	V	A	R	Y	N	S	L	V	S	S	G	K	D	T	D	F	E	R	P	N	L	P	R	A	L	N	E	G	N	Y	Y	A	I	E	V	T	P	G	V	H	H	T	M
Template Known Secondary structure				T									T						S	S									T	S																			T			T	T	T			S						S		S	S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	P	T	K	V	T	G	Q	A	L	T	V	N	E	K	G	E	D	V	V	V	P	G	L	F	A	V	G	E	I	A	C	V	S	V	H	G	A	N	R	L	G	G	N	S	L	L	D	L	V	V	F	G	R	A	A	G	L	H	L	Q	E	S	I
Query Conservation
Alig confidence																			.	.	.	.														.
Template Conservation																			.	.	.	.														.
Template Sequence		G	G	V	M	I	D	T	K	A	E	V	M	N	A	K	K	Q	.	.	.	.	V	I	P	G	L	Y	G	A	G	E	V	T	G	.	G	V	H	G	A	N	R	L	G	G	N	A	I	S	D	I	I	T	F	G	R	L	A	G	E	E	A	A	K	Y	S
Template Known Secondary structure						B		T	T						T	T			.	.	.	.									S	T	T			.	S	S	S	T	T	S			T	T
Template Predicted Secondary structure																			.	.	.	.														.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.					.	.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.