Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W6
Confidence58.60%DateThu Jan 5 11:11:35 GMT 2012
Rank11Aligned Residues69
% Identity20%Templatec2rffA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative nucleotidyltransferase; PDBTitle: crystal structure of a putative nucleotidyltransferase2 (np_343093.1) from sulfolobus solfataricus at 1.40 a3 resolution
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.... .....20.... .....30.........40.........50.........60.........70...
Predicted Secondary structure 
.




........











Query SS confidence 











.









. . . . . . . .
















































Query Sequence  NNEIQSVLMNAL. SLQEVHVSGD. . . . . . . . GSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPA
Query Conservation     

  
   
.    
 
 
 ........
 

 
 


  
 
 
 
 


 
   
   
  
 





 
 

 
Alig confidence 











.









........

































........






Template Conservation    


  
      
  
 



 


     







               
   
   

........


    
Template Sequence  AKEIVEEVASSFPNLEEVYIFGSRARGDYLDTSDIDILFVFKGIKEXNVFDRXYXVSRFIRGNVD. . . . . . . . YIVLDEG
Template Known Secondary structure 
TTSS


TT

SS
TT

GGG

SS........GG
Template Predicted Secondary structure 


























........
Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.. .......
 
   74.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  EWARDR
Query Conservation 

    
Alig confidence 





Template Conservation 
 
 

Template Sequence  EKDRVK
Template Known Secondary structure  GGGGS
Template Predicted Secondary structure 
Template SS confidence 





   90.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions