Job Description P0A9W6 Confidence 9.28% Date Thu Jan 5 11:11:35 GMT 2012 Rank 24 Aligned Residues 41 % Identity 22% Template c1xb4C_ PDB info PDB header:unknown function Chain: C: PDB Molecule:hypothetical 23.6 kda protein in yuh1-ura8 PDBTitle: crystal structure of subunit vps25 of the endosomal2 trafficking complex escrt-ii Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																		.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	L	F	D	G	M	S	R	V	K	K	.	.	.	Q	Q	T	V	Y	G	P	L	M	E	Y	I	A	D	N	R	I	H	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	A	Y	T	P	A	E	W	A	R
Query Conservation														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.				.	.	.																.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																						.	.
Template Sequence		K	N	L	F	N	N	E	D	.	I	Q	R	S	V	S	Q	V	F	I	D	E	I	W	S	Q	M	T	K	E	G	.	.	K	C	L	P	I	D	Q	S	G	R	R	S	S	N	T	T	T	T	R	Y	F	I	L	W	K	S	L	D	S	W	A	S
Template Known Secondary structure			B	T	T			T	T	.	T	T																		T	T	.	.	S						S	S	S				S	T	T	T								S	S
Template Predicted Secondary structure										.																						.	.
Template SS confidence
		73	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions