 |
Job Description | P32131 | Confidence | 27.08% | Date | Thu Jan 5 11:49:16 GMT 2012 |
Rank | 455 | Aligned Residues | 109 |
% Identity | 15% | Template | d1o5xa_ |
SCOP info | TIM beta/alpha-barrel
| Triosephosphate isomerase (TIM)
| Triosephosphate isomerase (TIM)
|
Resolution | 1.10 |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | H | L | R | A | E | G | F | N | R | L | S | M | G | V | Q | D | F | N | K | E | V | Q | R | L | V | N | R | E | Q | D | E | E | F | I | F | A | L | L | N | H | A | R | E | I | G | F | T | S | T | N | I | D | L | I | Y | G | L | P | . |
. |
. |
. |
. |
. |
K | Q | T | P | E | S | F | A | F | T | L | K | R | V |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
| . | . | . | . | . | . |
|
|
|   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|   |   |   |
|
|
|
| . | . | . | . |
|
|
|
|
|   |   |
|   |
| . | . |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
| . | . | . |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
A | E | I | A | K | D | L | N | I | E | Y | V | I | I | G | . |
. |
. |
. |
H | F | E | R | R | K | Y | F | H | E | . |
. |
T | D | E | D | V | R | E | K | L | Q | A | S | L | K | N | N | L | K | A | V | V | C | . |
. |
. |
F | G | E | S | L | E | Q | R | E | Q | N | K | T | I | E | V | I | T | K | Q | V | K | A | F |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  | S |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | L | N | P | D | R | L | S | V | F | N | Y | A | H | L | P | T | I | F | A | A | Q | R | K | I | K | D | A | D | L | P | S | P | Q | Q | K | L | D | I | L | Q | E | T | I | A | F | L | T | Q |
Query Conservation |   |
  |   |
|   |
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
| . |   |   |   |   |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
Template Sequence |   |
V | D | L | I | . |
D | N | F | D | N | V | I | L | V | Y | E | P | . |
. |
. |
. |
. |
L | W | A | I | G | T | G | K | T | A | T | P | E | Q | A | Q | L | V | H | K | E | I | R | K | I | V | K | D |
Template Known Secondary structure |   |
G | G | G |
| . |
|
| T | T | S |  |  |  |  |  |
|
| . | . | . | . | . | G | G | G | S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|  | . |  |  |
|
|
|  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | |
. | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|