Phyre 2 alignment of P32131 with c3s2wB

Job Description P32131
Confidence 86.65% Date Thu Jan 5 11:49:16 GMT 2012

Rank 91 Aligned Residues 71

% Identity 11% Template c3s2wB_

PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1

Resolution 2.45 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence	D	V	I	K	S	L	I	C	N	F	R	L	D	Y	A	P	I	E	K	Q	W	D	L	H	F	A	D	Y	F	A	E	D	L	K	L	L	A	P	L	A	K	D	G	L	V	D	V	D	E	.	.	K	G	I	Q	V	T	A	K	G	R	L	L	I	R	N	I	C	M	C	F	D	T	Y	L	R	Q
Query Conservation																																																		.	.
Alig confidence																										.	.	.	.																					.	.
Template Conservation																										.	.	.	.
Template Sequence	P	F	L	X	R	L	Y	R	E	D	G	I	N	Q	E	S	L	S	D	Y	L	K	I	D	K	.	.	.	.	G	T	T	A	R	A	I	Q	K	L	V	D	E	G	Y	V	F	R	Q	R	R	S	Y	R	V	F	L	T	E	K	G	K	K	L	E	P	D	X	K	K	I	A	S	E	W	G	E	I
Template Known Secondary structure									S	S	S											T				.	.	.	.													T	T	S																			T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
	51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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