Job Description P32131 Confidence 99.57% Date Thu Jan 5 11:49:16 GMT 2012 Rank 8 Aligned Residues 205 % Identity 17% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																	.																										.
Query SS confidence																																					.	.																	.																										.
Query Sequence		C	H	K	L	C	Y	F	C	G	C	N	K	I	V	T	R	Q	Q	H	K	A	D	Q	Y	L	D	A	L	E	Q	E	I	V	H	R	.	.	A	P	L	F	A	G	R	H	V	S	Q	L	H	W	G	G	.	G	T	P	T	Y	L	N	K	A	Q	I	S	R	L	M	K	L	L	R	E	N	F	Q	F	N	.
Query Conservation																																					.	.																	.																										.
Alig confidence																																					.	.																	.				.																						.
Template Conservation																																																											.
Template Sequence		C	A	L	E	C	K	F	C	S	T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E	P	.	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L
Template Known Secondary structure			S	S			T	T		G	G	G	T	T																													S	S		S		S						S	S	S		G	.	G	G														S	T	T	T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																															.	.	.																			.	.	.	.
Query SS confidence																																															.	.	.																			.	.	.	.
Query Sequence		A	D	A	E	I	S	I	E	V	D	P	R	E	I	E	L	D	V	L	D	H	L	R	A	E	G	F	N	R	L	S	M	G	V	Q	D	F	N	K	E	V	Q	R	L	V	.	.	.	N	R	E	Q	D	E	E	F	I	F	A	L	L	N	H	A	R	E	.	.	.	.	I	G	F	T	S	T	N	I	D	L
Query Conservation																																															.	.	.																			.	.	.	.
Alig confidence														.	.	.																															.	.	.																			.	.	.	.
Template Conservation														.	.	.
Template Sequence		S	K	R	R	V	T	L	S	T	S	G	V	.	.	.	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V
Template Known Secondary structure			G	G	G						S			.	.	.																						S	S								S	G	G	G	G	T	S																	T	T	T	T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	G	L	P	K	Q	T	P	E	S	F	A	F	T	L	K	R	V	A	E	L	N	P	D	R	L	S	V	F	N	Y	A	H	L	P	T	I	F	A	A	Q	R	K	I	K	D	A	D	L	P	S	P	Q	Q	K	L	D	I	L	Q	E	T	I	A	F	L	T	Q	S	G	Y	Q
Query Conservation
Alig confidence																								.																.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																								.																.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	.	P	C	K	I	N	L	I	P	W	N	P	F	P	G	A	.	.	.	.	.	.	.	.	.	P	Y	G	R	S	S	N	S	R	I	D	R	F	S	.	.	.	K	V	L	M	S	Y	G	F	T
Template Known Secondary structure			B	T	T	T	T		S											T	T	T	S	.													T	T		.	.	.	.	.	.	.	.	.				B											.	.	.						T	T
Template Predicted Secondary structure																								.																.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.										.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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