 |
Job Description | P32131 | Confidence | 22.60% | Date | Thu Jan 5 11:49:16 GMT 2012 |
Rank | 499 | Aligned Residues | 73 |
% Identity | 11% | Template | c3qc3B_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; |
PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
|
Resolution | 2.20 Å |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | V | L | D | H | L | R | A | E | G | F | N | R | L | S | M | G | V | Q | . |
. |
. |
. |
. |
. |
. |
. |
D | F | N | K | E | V | Q | R | L | V | N | R | E | Q | D | E | E | F | I | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | L | N | H | A | R | E | I | G | F | T | S | T | N | I | D | L | I | Y | G | L |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
| . | . | . |   |
|
|   |   |
Template Sequence |   |
G | A | E | C | L | R | X | L | D | S | G | A | D | Y | L | H | L | D | V | X | D | G | H | F | V | P | N | I | T | F | G | H | P | V | V | E | S | L | R | K | Q | L | G | Q | D | P | F | F | D | X | H | X | X | V | S | K | P | E | Q | W | V | K | P | X | A | V | A | G | A | N | Q | Y | . |
. |
. |
T | F | H | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  |  | B | S | S | S | S | S |
| B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  | . | . | . |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . |
  |
  |   |
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | Q | T | P | E | S | F | A | F | T | L | K | R |
Query Conservation |   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | T | E | N | P | G | A | L | I | K | D | I | R | E |
Template Known Secondary structure |   |
G |
| S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|