Job Description P32131 Confidence 29.99% Date Thu Jan 5 11:49:16 GMT 2012 Rank 439 Aligned Residues 151 % Identity 15% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		110	.	.	.	.													.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query Sequence		W	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	P	T	Y	L	N	K	A	Q	I	S	R	L	M	K	L	L	R	E	N	F	Q	F	N	A	D	A	E	I	S	I	E	V	D	P	R	E	I	E	L	D	V	L	D	H	L	R	A	E	G	F	N	R	L	S	M	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																								.																																.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		F	G	A	G	L	W	H	F	A	N	Y	I	D	R	Y	A	V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	.	Y	V	D	L	P	Y	P	F	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I	T	P	E	I	Y	L	Q	K
Template Known Secondary structure						G	G	G	G	S					S	S		T	T		S	S																S	S			.							S		S	T	T														T										T	T	S	G	G
Template Predicted Secondary structure																																										.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																										.	.	.									.	.	.	.	.
Query SS confidence		.	.	.	.																																										.	.	.									.	.	.	.	.
Query Sequence		.	.	.	.	G	V	Q	D	F	N	K	E	V	Q	R	L	V	N	R	E	Q	D	E	E	F	I	F	A	L	L	N	H	A	R	E	I	G	F	T	S	T	N	I	D	L	.	.	.	I	Y	G	L	P	K	Q	T	.	.	.	.	.	P	E	S	F	A	F	T	L	K	R	V	A	E	L	N	P	D	R	L
Query Conservation		.	.	.	.																																										.	.	.									.	.	.	.	.
Alig confidence		.	.	.	.													.	.	.	.	.																									.	.	.									.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	.	.	.	.	.	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P	D	V	K
Template Known Secondary structure		G	T	T		S	T	T		S	S							.	.	.	.	.																T		S							T	T				S	S	T	T	S	S																			T		T	T	S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	F	N	Y	A	H	L	P	T	I	F	A	A	Q	R	K	I	K	D	A	D	L	P	S	P	Q	Q	K	L	D	I	L	Q	E	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		F	A	I	E	Y	K	P	R	E	P	R	.	.	.	.	.	.	.	V	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I
Template Known Secondary structure								S		S	S	S	.	.	.	.	.	.	.	S			S	S		S
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions